000104

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Collection GlyGen Motifs
Accession 000104
Preferred Name B-GD1b
Name(s) B-GD1b
Keyword(s) Disialylated ganglioside
Glycolipid
Aglycon Cer
Reducing-End Only? true
Alignment Whole-Glycan
GlyTouCan Accession G72557NR
Enzyme(s)
Cross Reference(s) GlycanDictionary:GD000020
Reference(s) Cummings (2009) The repertoire of glycan determinants in the human glycome
Ariga et al. (1987) Characterization of tumor-associated fucogangliosides from PC 12 pheochromocytoma cells
Same As GD.R000479, GDC.000104, GDV.000019, GM.G72557NR
Topology Cluster
GlycoCT

RES 1b:b-dglc-HEX-1:5 2b:b-dgal-HEX-1:5 3b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 4s:n-acetyl 5b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 6s:n-acetyl 7b:b-dgal-HEX-1:5 8s:n-acetyl 9b:b-dgal-HEX-1:5 10b:a-lgal-HEX-1:5|6:d 11b:a-dgal-HEX-1:5 LIN 1:1o(4+1)2d 2:2o(3+2)3d 3:3d(5+1)4n 4:3o(8+2)5d 5:5d(5+1)6n 6:2o(4+1)7d 7:7d(2+1)8n 8:7o(3+1)9d 9:9o(2+1)10d 10:9o(3+1)11d

WURCS
WURCS=2.0/6,8,7/[a2122h-1b_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O][a2112h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5][a2112h-1a_1-5]/1-2-3-3-4-2-5-6/a4-b1_b3-c2_b4-e1_c8-d2_e3-f1_f2-g1_f3-h1


Alignments

Download: Strict Motif Alignments, All Motif Alignments.

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