001008

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Collection GlyGen Motifs
Accession 001008
Preferred Name O-Glycan core 2 fuzzy
Name(s) O-Glycan core 2 fuzzy
Keyword(s) O-glycan classification
Aglycon Ser/Thr
Reducing-End Only? true
Alignment Core
GlyTouCan Accession G00034MO
Cross Reference(s)
Reference(s) Stanley et al. (2017) Structures Common to Different Glycans
Same As GM.G00034MO, GTC.G00034MO
Topology Cluster
GlycoCT

RES 1b:x-dgal-HEX-x:x 2s:n-acetyl 3b:b-dgal-HEX-1:5 4b:b-dglc-HEX-1:5 5s:n-acetyl LIN 1:1d(2+1)2n 2:1o(3+1)3d 3:1o(6+1)4d 4:4d(2+1)5n

WURCS
WURCS=2.0/3,3,2/[u2112h_2*NCC/3=O][a2112h-1b_1-5][a2122h-1b_1-5_2*NCC/3=O]/1-2-3/a3-b1_a6-c1


Alignments

Download: Strict Motif Alignments, All Motif Alignments.

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