001007

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Collection GlyGen Motifs
Accession 001007
Preferred Name O-Glycan core 2
Name(s) O-Glycan core 2
Keyword(s) O-glycan classification
Aglycon Ser/Thr
Reducing-End Only? true
Alignment Core
GlyTouCan Accession G00033MO
Cross Reference(s)
Reference(s) Stanley et al. (2017) Structures Common to Different Glycans
Same As GD.R000227, GDB.002163, GM.G00033MO, GTC.G00033MO
Topology Cluster
GlycoCT

RES 1b:a-dgal-HEX-1:5 2s:n-acetyl 3b:b-dgal-HEX-1:5 4b:b-dglc-HEX-1:5 5s:n-acetyl LIN 1:1d(2+1)2n 2:1o(3+1)3d 3:1o(6+1)4d 4:4d(2+1)5n

WURCS
WURCS=2.0/3,3,2/[a2112h-1a_1-5_2*NCC/3=O][a2112h-1b_1-5][a2122h-1b_1-5_2*NCC/3=O]/1-2-3/a3-b1_a6-c1


Alignments

Download: Strict Motif Alignments, All Motif Alignments.

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