000120

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Collection GlyGen Motifs
Accession 000120
Preferred Name GH1ca
Name(s) GH1ca
GH1calpha
Keyword(s) Glycolipid
Hexasialylated ganglioside
Aglycon Cer
Reducing-End Only? true
Alignment Whole-Glycan
GlyTouCan Accession G14091MR
Cross Reference(s)
Reference(s) Cummings (2009) The repertoire of glycan determinants in the human glycome
Nakamura et al. (2000) Novel polysialogangliosides of skate brain structural determination of tetra, penta ...
Same As GD.R000042, GDC.000120, GDV.000122, GM.G14091MR
Topology Cluster
GlycoCT

RES 1b:b-dglc-HEX-1:5 2b:b-dgal-HEX-1:5 3b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 4s:n-acetyl 5b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 6s:n-acetyl 7b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 8s:n-acetyl 9b:b-dgal-HEX-1:5 10s:n-acetyl 11b:b-dgal-HEX-1:5 12b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 13s:n-acetyl 14b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 15s:n-acetyl 16b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 17s:n-acetyl LIN 1:1o(4+1)2d 2:2o(3+2)3d 3:3d(5+1)4n 4:3o(8+2)5d 5:5d(5+1)6n 6:5o(8+2)7d 7:7d(5+1)8n 8:2o(4+1)9d 9:9d(2+1)10n 10:9o(3+1)11d 11:11o(3+2)12d 12:12d(5+1)13n 13:12o(8+2)14d 14:14d(5+1)15n 15:9o(6+2)16d 16:16d(5+1)17n

WURCS
WURCS=2.0/4,10,9/[a2122h-1b_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O][a2112h-1b_1-5_2*NCC/3=O]/1-2-3-3-3-4-2-3-3-3/a4-b1_b3-c2_b4-f1_c8-d2_d8-e2_f3-g1_f6-j2_g3-h2_h8-i2


Alignments

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