000119
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| Collection | GlyGen Motifs |
|---|---|
| Accession | 000119 |
| Preferred Name | GP1ca |
| Name(s) | GP1ca GP1calpha |
| Keyword(s) | Glycolipid Pentasialylated ganglioside |
| Aglycon | Cer |
| Reducing-End Only? | true |
| Alignment | Whole-Glycan |
| GlyTouCan Accession | G04433GV |
| Cross Reference(s) | |
| Reference(s) | Cummings (2009) The repertoire of glycan determinants in the human glycome Nakamura et al. (2000) Novel polysialogangliosides of skate brain structural determination of tetra, penta ... |
| Same As | GD.R000137, GDV.000095, GM.G04433GV |
| GlycoCT | RES 1b:b-dglc-HEX-1:5 2b:b-dgal-HEX-1:5 3b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 4s:n-acetyl 5b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 6s:n-acetyl 7b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 8s:n-acetyl 9b:b-dgal-HEX-1:5 10s:n-acetyl 11b:b-dgal-HEX-1:5 12b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 13s:n-acetyl 14b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 15s:n-acetyl LIN 1:1o(4+1)2d 2:2o(3+2)3d 3:3d(5+1)4n 4:3o(8+2)5d 5:5d(5+1)6n 6:5o(8+2)7d 7:7d(5+1)8n 8:2o(4+1)9d 9:9d(2+1)10n 10:9o(3+1)11d 11:11o(3+2)12d 12:12d(5+1)13n 13:9o(6+2)14d 14:14d(5+1)15n |
| WURCS | WURCS=2.0/4,9,8/[a2122h-1b_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O][a2112h-1b_1-5_2*NCC/3=O]/1-2-3-3-3-4-2-3-3/a4-b1_b3-c2_b4-f1_c8-d2_d8-e2_f3-g1_f6-i2_g3-h2
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Alignments
Download: Strict Motif Alignments, All Motif Alignments.
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