000117

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Collection GlyGen Motifs
Accession 000117
Preferred Name GQ1c
Name(s) GQ1c
Keyword(s) Glycolipid
Tetrasialylated ganglioside
Aglycon Cer
Reducing-End Only? true
Alignment Whole-Glycan
GlyTouCan Accession G99524KA
Cross Reference(s) GlycanDictionary:GD000098
Reference(s) Cummings (2009) The repertoire of glycan determinants in the human glycome
Kasai et al. (1983) The monoclonal antibody A2B5 is specific to ganglioside ...
Same As GD.R000534, GDC.000117, GDV.000101, GM.G99524KA
Topology Cluster
GlycoCT

RES 1b:b-dglc-HEX-1:5 2b:b-dgal-HEX-1:5 3b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 4s:n-acetyl 5b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 6s:n-acetyl 7b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 8s:n-acetyl 9b:b-dgal-HEX-1:5 10s:n-acetyl 11b:b-dgal-HEX-1:5 12b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 13s:n-acetyl LIN 1:1o(4+1)2d 2:2o(3+2)3d 3:3d(5+1)4n 4:3o(8+2)5d 5:5d(5+1)6n 6:5o(8+2)7d 7:7d(5+1)8n 8:2o(4+1)9d 9:9d(2+1)10n 10:9o(3+1)11d 11:11o(3+2)12d 12:12d(5+1)13n

WURCS
WURCS=2.0/4,8,7/[a2122h-1b_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O][a2112h-1b_1-5_2*NCC/3=O]/1-2-3-3-3-4-2-3/a4-b1_b3-c2_b4-f1_c8-d2_d8-e2_f3-g1_g3-h2


Alignments

Download: Strict Motif Alignments, All Motif Alignments.

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