000116

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Collection GlyGen Motifs
Accession 000116
Preferred Name GQ1ba
Name(s) GQ1ba
GQ1balpha
Keyword(s) Glycolipid
Tetrasialylated ganglioside
Aglycon Cer
Reducing-End Only? true
Alignment Whole-Glycan
GlyTouCan Accession G54733XO
Cross Reference(s) GlycanDictionary:GD000097
Reference(s) Cummings (2009) The repertoire of glycan determinants in the human glycome
Kusunoki et al. (1993) Generation of a monoclonal antibody specific for a new class ...
Nakamura et al. (2000) Novel polysialogangliosides of skate brain structural determination of tetra, penta ...
Same As GD.R000262, GDC.000116, GDH.000062, GDV.000091, GE.EP0112, GM.G54733XO, UCM.000062
Topology Cluster
GlycoCT

RES 1b:b-dglc-HEX-1:5 2b:b-dgal-HEX-1:5 3b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 4s:n-acetyl 5b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 6s:n-acetyl 7b:b-dgal-HEX-1:5 8s:n-acetyl 9b:b-dgal-HEX-1:5 10b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 11s:n-acetyl 12b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 13s:n-acetyl LIN 1:1o(4+1)2d 2:2o(3+2)3d 3:3d(5+1)4n 4:3o(8+2)5d 5:5d(5+1)6n 6:2o(4+1)7d 7:7d(2+1)8n 8:7o(3+1)9d 9:9o(3+2)10d 10:10d(5+1)11n 11:7o(6+2)12d 12:12d(5+1)13n

WURCS
WURCS=2.0/4,8,7/[a2122h-1b_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O][a2112h-1b_1-5_2*NCC/3=O]/1-2-3-3-4-2-3-3/a4-b1_b3-c2_b4-e1_c8-d2_e3-f1_e6-h2_f3-g2


Alignments

Download: Strict Motif Alignments, All Motif Alignments.

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