000114

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Collection GlyGen Motifs
Accession 000114
Preferred Name GQ1aa
Name(s) GQ1aa
GQ1aalpha
Keyword(s) Glycolipid
Tetrasialylated ganglioside
Aglycon Cer
Reducing-End Only? true
Alignment Whole-Glycan
GlyTouCan Accession G90598GO
Cross Reference(s)
Reference(s) Cummings (2009) The repertoire of glycan determinants in the human glycome
Nakamura et al. (2000) Novel polysialogangliosides of skate brain structural determination of tetra, penta ...
Same As GD.R000289, GDC.000114, GDV.000121, GM.G90598GO
Topology Cluster
GlycoCT

RES 1b:b-dglc-HEX-1:5 2b:b-dgal-HEX-1:5 3b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 4s:n-acetyl 5b:b-dgal-HEX-1:5 6s:n-acetyl 7b:b-dgal-HEX-1:5 8b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 9s:n-acetyl 10b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 11s:n-acetyl 12b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 13s:n-acetyl LIN 1:1o(4+1)2d 2:2o(3+2)3d 3:3d(5+1)4n 4:2o(4+1)5d 5:5d(2+1)6n 6:5o(3+1)7d 7:7o(3+2)8d 8:8d(5+1)9n 9:8o(8+2)10d 10:10d(5+1)11n 11:5o(6+2)12d 12:12d(5+1)13n

WURCS
WURCS=2.0/4,8,7/[a2122h-1b_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O][a2112h-1b_1-5_2*NCC/3=O]/1-2-3-4-2-3-3-3/a4-b1_b3-c2_b4-d1_d3-e1_d6-h2_e3-f2_f8-g2


Alignments

Download: Strict Motif Alignments, All Motif Alignments.

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