000113

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Collection GlyGen Motifs
Accession 000113
Preferred Name GT1c
Name(s) GT1c
Keyword(s) Glycolipid
Trisialylated ganglioside
Aglycon Cer
Reducing-End Only? true
Alignment Whole-Glycan
GlyTouCan Accession G78818SP
Cross Reference(s) GlycanDictionary:GD000102
Reference(s) Cummings (2009) The repertoire of glycan determinants in the human glycome
Hirabayashi et al. (1988) Developmental changes of C-series polysialogangliosides in chick brains revealed by ...
Same As GD.R000387, GDB.002235, GDC.000113, GDH.000035, GDV.000032, GE.EP0033, GM.G78818SP, UCM.000035
Topology Cluster
GlycoCT

RES 1b:b-dglc-HEX-1:5 2b:b-dgal-HEX-1:5 3b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 4s:n-acetyl 5b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 6s:n-acetyl 7b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 8s:n-acetyl 9b:b-dgal-HEX-1:5 10s:n-acetyl 11b:b-dgal-HEX-1:5 LIN 1:1o(4+1)2d 2:2o(3+2)3d 3:3d(5+1)4n 4:3o(8+2)5d 5:5d(5+1)6n 6:5o(8+2)7d 7:7d(5+1)8n 8:2o(4+1)9d 9:9d(2+1)10n 10:9o(3+1)11d

WURCS
WURCS=2.0/4,7,6/[a2122h-1b_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O][a2112h-1b_1-5_2*NCC/3=O]/1-2-3-3-3-4-2/a4-b1_b3-c2_b4-f1_c8-d2_d8-e2_f3-g1


Alignments

Download: Strict Motif Alignments, All Motif Alignments.

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