000097

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Collection GlyGen Motifs
Accession 000097
Preferred Name Sialopentaosylceramide
Name(s) Sialopentaosylceramide
Keyword(s) Glycolipid
Aglycon Cer
Reducing-End Only? true
Alignment Whole-Glycan
GlyTouCan Accession G13224CR
Cross Reference(s) GlycanDictionary:GD000148
Reference(s) Cummings (2009) The repertoire of glycan determinants in the human glycome
Dohi et al. (1990) Sialylpentaosylceramide detected with anti-GM2 monoclonal antibody. Structural characterization and complementary ...
Same As GD.R000465, GDC.000097, GDV.000070, GM.G13224CR
Topology Cluster
GlycoCT

RES 1b:b-dglc-HEX-1:5 2b:b-dgal-HEX-1:5 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dgal-HEX-1:5 6b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 7s:n-acetyl 8b:b-dgal-HEX-1:5 9s:n-acetyl LIN 1:1o(4+1)2d 2:2o(3+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+2)6d 6:6d(5+1)7n 7:5o(4+1)8d 8:8d(2+1)9n

WURCS
WURCS=2.0/5,6,5/[a2122h-1b_1-5][a2112h-1b_1-5][a2122h-1b_1-5_2*NCC/3=O][Aad21122h-2a_2-6_5*NCC/3=O][a2112h-1b_1-5_2*NCC/3=O]/1-2-3-2-4-5/a4-b1_b3-c1_c4-d1_d3-e2_d4-f1


Alignments

Download: Strict Motif Alignments, All Motif Alignments.

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