000004

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Collection GlyGen Motifs
Accession 000004
Preferred Name i antigen
Name(s) i antigen
Keyword(s) LacNAc
N-acetyllactosamine
N-acetyllactosamine type 2
Aglycon R
Reducing-End Only? false
Alignment Substructure
GlyTouCan Accession G46055MA
Enzyme(s) B3GNT2, B3GNT4, B3GNT8, B3gnt2, B3gnt4, B3gnt8, B4GALT1, B4GALT2, B4GALT3, B4galt1, B4galt2, B4galt3, MGAT1, MGAT2, MGAT4A, MGAT4B, MGAT4C, MGAT5, MGAT5B, Mgat1, Mgat2, Mgat4a, Mgat4b, Mgat4c, Mgat5, Mgat5b
Cross Reference(s) GlycanDictionary:GSD000111
Reference(s) Cummings (2009) The repertoire of glycan determinants in the human glycome
Feizi (1981) The blood group Ii system: a carbohydrate antigen system defined ...
Same As GD.R000214, GDB.002172, GDC.000004, GDV.000044, GM.G46055MA
Topology Cluster
GlycoCT

RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dgal-HEX-1:5 4b:b-dglc-HEX-1:5 5s:n-acetyl 6b:b-dgal-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:b-dgal-HEX-1:5 LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3o(3+1)4d 4:4d(2+1)5n 5:4o(4+1)6d 6:6o(3+1)7d 7:7d(2+1)8n 8:7o(4+1)9d

WURCS
WURCS=2.0/2,6,5/[a2122h-1b_1-5_2*NCC/3=O][a2112h-1b_1-5]/1-2-1-2-1-2/a4-b1_b3-c1_c4-d1_d3-e1_e4-f1


Alignments

Download: Strict Motif Alignments, All Motif Alignments.

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