Cummings (2009) The repertoire of glycan determinants in the human glycome
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Cummings RD. The repertoire of glycan determinants in the human glycome. Mol Biosyst. 2009 5(10):1087-104. doi:10.1039/b907931a. PMID: 19756298.
Motifs
| Accession | Name(s) | Aglycon | Reducing-End? | Alignment |
|---|---|---|---|---|
| GGM.000001 |  Type 2 LN, N-acetyllactosamine |
R | false | Substructure |
| GGM.000002 |  Type 2 LN2, i antigen |
R | false | Substructure |
| GGM.000003 |  I antigen |
R | false | Substructure |
| GGM.000004 |  i antigen |
R | false | Substructure |
| GGM.000005 |  Type 1 LN |
R | false | Substructure |
| GGM.000006 |  Type 1 LN2 |
R | false | Substructure |
| GGM.000007 |  Type 1 LN3 |
R | false | Substructure |
| GGM.000008 |  Tn antigen |
Ser/Thr | true | Whole-Glycan |
| GGM.000009 |  T antigen, TF antigen |
Ser/Thr | true | Whole-Glycan |
| GGM.000010 |  H antigen (type 3) |
Ser/Thr | true | Whole-Glycan |
| GGM.000011 |  A antigen (type 3) |
Ser/Thr | true | Whole-Glycan |
| GGM.000012 |  Sialyl Tn antigen |
Ser/Thr | true | Whole-Glycan |
| GGM.000013 |  Sialyl T antigen |
Ser/Thr | true | Whole-Glycan |
| GGM.000014 |  Di-sialyl T antigen |
Ser/Thr | true | Whole-Glycan |
| GGM.000015 |  a-Gal antigen, alpha-Gal antigen |
R | false | Substructure |
| GGM.000016 |  LacdiNAc, LDN |
R | false | Substructure |
| GGM.000017 |  Fucosylated LDN, LDNF |
R | false | Substructure |
| GGM.000018 |  Lewis x, Lex, SSEA-1, Le^x |
R | false | Substructure |
| GGM.000019 |  Lewis y, Ley, Le^y |
R | false | Substructure |
| GGM.000020 |  Lewis a, Lea, Le^a |
R | false | Substructure |
| GGM.000021 |  Lewis b, Leb, Le^b |
R | false | Substructure |
| GGM.000022 |  Sialyl Lewis x, Slex, SLex, SLe^x |
R | false | Nonreducing-End |
| GGM.000024 |  Sialyl Lewis a, Slea, CA19-9 antigen, SLea, SLe^a |
R | false | Nonreducing-End |
| GGM.000025 |  6'-Sulfo Sialyl Lewis x, 6'-sulfo SLex, 6'-Sulfo-sialyl Lewis x, 6'-sulfo SLe^x |
R | false | Nonreducing-End |
| GGM.000026 |  2,6-sialyl-Sulfo-LN, 6-sialyl-6-sulfo LN |
R | false | Nonreducing-End |
| GGM.000027 |  6-Sulfo Sialyl Lewis x, 6-sulfo SLex, 6-Sulfo-sialyl Lewis x, 6-sulfo SLe^x |
R | false | Nonreducing-End |
| GGM.000028 |  6,6'-bisSulfo-Lewis x, 6,6'-bissulfo Lex, 6,6'-Disulfo Sialyl Lewis x, 6,6'-bissulfo Le^x |
R | false | Nonreducing-End |
| GGM.000029 |  3'-Sulfo Lewis x, 3'-sulfo Lex, 3'-Sulfo-Lewis x, 3'-sulfo Le^x |
R | false | Substructure |
| GGM.000030 |  3'-Sulfo Lewis a, 3'-Sulfo Lea, 3'-Sulfo-Lewis a, 3'-Sulfo Le^a |
R | false | Substructure |
| GGM.000031 |  Lex-Lex, Le^x-Le^x |
R | false | Substructure |
| GGM.000032 |  SDLex, SDLe^x |
R | false | Nonreducing-End |
| GGM.000033 |  VIM-2 |
R | false | Nonreducing-End |
| GGM.000034 |  3-Sialyl-LN (type 2) |
R | false | Nonreducing-End |
| GGM.000035 |  6-Sialyl-GalNAc, 6-Sialyl LN (type 1), 6-Sialyl LN (type 2) |
R | false | Nonreducing-End |
| GGM.000036 |  Blood group H (type 2) |
R | false | Substructure |
| GGM.000037 |  Blood group B (type 2) |
R | false | Substructure |
| GGM.000038 |  Blood group A (type 2) |
R | false | Substructure |
| GGM.000039 |  Blood group A (type 2) - Lewis y, A-Ley, A-Le^y |
R | false | Substructure |
| GGM.000040 |  Blood group A1 (type 3) |
R | false | Substructure |
| GGM.000041 |  Blood group A2 (A-associated H type 3) |
R | false | Substructure |
| GGM.000042 |  Blood group H (type 1) |
R | false | Substructure |
| GGM.000043 |  Blood group B (type 1) |
R | false | Substructure |
| GGM.000044 |  Blood group A (type 1) |
R | false | Substructure |
| GGM.000045 |  Blood group H (type 2) - Lewis y, H-Ley, H-Le^y |
R | false | Substructure |
| GGM.000046 |  Blood group B (type 1) - Lewis b, B-Leb, B-Le^b |
R | false | Substructure |
| GGM.000047 |  Blood group A (type 1) - Lewis b, A-Leb, A-Le^b |
R | false | Substructure |
| GGM.000049 |  4'-sulfated LDN |
R | false | Substructure |
| GGM.000050 |  Sialylated LDN |
R | false | Nonreducing-End |
| GGM.000051 |  Sda/CT antigen, Sd^a/CT antigen |
R | false | Substructure |
| GGM.000053 |  SLex Core 2 O-glycan, SLe^x Core 2 O-glycan |
Ser/Thr | true | Core |
| GGM.000054 |  Diphosphorylated Man6, Diphosphorylated Man_6 |
R | false | Substructure |
| GGM.000055 |  O-Linked mannose |
Ser/Thr | true | Whole-Glycan |
| GGM.000056 |  2,6-Branched O-mannose |
Ser/Thr | true | Whole-Glycan |
| GGM.000057 |  O-Mannose Lex, O-Mannose Le^x |
Ser/Thr | true | Core |
| GGM.000058 |  HNK-1 antigen |
R | false | Nonreducing-End |
| GGM.000059 |  HNK-1 on O-mannose |
Ser/Thr | true | Whole-Glycan |
| GGM.000060 |  Glucosylceramide |
Cer | true | Whole-Glycan |
| GGM.000061 |  Galactosylceramide |
Cer | true | Whole-Glycan |
| GGM.000062 |  Seminolipid |
Other | true | Whole-Glycan |
| GGM.000063 | Sulfatide |
Cer | true | Whole-Glycan |
| GGM.000064 |  Lactosylceramide |
Cer | true | Whole-Glycan |
| GGM.000065 |  Ceramide dihexosyl sulfate |
Cer | true | Whole-Glycan |
| GGM.000066 |  Monosulfated gangliotetraosylceramide |
Cer | true | Whole-Glycan |
| GGM.000067 |  Lactotriaosylceramide, Lc3, Lc_3 |
Cer | true | Whole-Glycan |
| GGM.000068 |  Pk antigen, P^k antigen, Gb3, Gb_3, globotriaosylceramide |
Cer | true | Whole-Glycan |
| GGM.000069 |  P1 antigen |
Cer | true | Whole-Glycan |
| GGM.000070 |  Globoside, P antigen, Gb4, Cytolipin K, Globoside I, Globotetraosylceramide |
Cer | true | Whole-Glycan |
| GGM.000071 |  Isoglobotetraosylceramide |
Cer | true | Whole-Glycan |
| GGM.000072 |  Mono-sulfated globopentaosylceramide |
Cer | true | Whole-Glycan |
| GGM.000073 |  Mono-sulfated globotetraosylceramide |
Cer | true | Whole-Glycan |
| GGM.000074 |  Sulfo-isogloboside, Mono-sulfated isoglobotetraosylceramide |
Cer | true | Whole-Glycan |
| GGM.000075 |  LcGg4 |
Cer | true | Whole-Glycan |
| GGM.000076 |  Gb5, Globopentaosylceramide |
Cer | true | Whole-Glycan |
| GGM.000077 |  Paragloboside |
Cer | true | Whole-Glycan |
| GGM.000078 |  GL-6 fucosylated, globoH |
Cer | true | Whole-Glycan |
| GGM.000079 | SSEA-3 |
Cer | true | Whole-Glycan |
| GGM.000080 |  GL-7 globoseries ganglioside, SSEA-4 |
Cer | true | Whole-Glycan |
| GGM.000081 |  Sialosyl paragloboside |
Cer | true | Whole-Glycan |
| GGM.000082 |  Disialosyl globopentaosylceramide |
Cer | true | Whole-Glycan |
| GGM.000083 | Cytolipin R |
Cer | true | Whole-Glycan |
| GGM.000084 |  Forssman glycolipid, Globopentosylceramide, Forssman antigen |
Cer | true | Whole-Glycan |
| GGM.000085 |  para-Forssman glycolipid |
Cer | true | Whole-Glycan |
| GGM.000086 | Blood group H (type 4) |
Cer | true | Whole-Glycan |
| GGM.000087 |  Blood group B (type 4) |
Cer | true | Whole-Glycan |
| GGM.000088 |  Blood group A (type 4) |
Cer | true | Whole-Glycan |
| GGM.000089 |  GM4 |
Cer | true | Whole-Glycan |
| GGM.000090 |  GM3 |
Cer | true | Whole-Glycan |
| GGM.000091 |  GD3 |
Cer | true | Whole-Glycan |
| GGM.000092 |  GT3 |
Cer | true | Whole-Glycan |
| GGM.000093 | 9-O-Acetyl GD3 |
Cer | true | Whole-Glycan |
| GGM.000094 |  GD2 |
Cer | true | Whole-Glycan |
| GGM.000095 |  GM2 |
Cer | true | Whole-Glycan |
| GGM.000096 |  N-Glycolyl-GM2 |
Cer | true | Whole-Glycan |
| GGM.000097 |  Sialopentaosylceramide |
Cer | true | Whole-Glycan |
| GGM.000098 |  GM1 |
Cer | true | Whole-Glycan |
| GGM.000099 |  Asialo-GM1, Gangliotetraosylceramide |
Cer | true | Whole-Glycan |
| GGM.000100 |  cisGM1, GM1b |
Cer | true | Whole-Glycan |
| GGM.000101 |  2-Fucosyl-GM1 |
Cer | true | Whole-Glycan |
| GGM.000102 |  B-GM1 |
Cer | true | Whole-Glycan |
| GGM.000103 |  2-Fucosyl-GD1b |
Cer | true | Whole-Glycan |
| GGM.000104 |  B-GD1b |
Cer | true | Whole-Glycan |
| GGM.000105 |  GD1, GD1c |
Cer | true | Whole-Glycan |
| GGM.000106 |  GD1a, GD1alpha |
Cer | true | Whole-Glycan |
| GGM.000107 |  GD1a |
Cer | true | Whole-Glycan |
| GGM.000108 |  GD1b |
Cer | true | Whole-Glycan |
| GGM.000109 |  GT2 |
Cer | true | Whole-Glycan |
| GGM.000110 |  GT1a |
Cer | true | Whole-Glycan |
| GGM.000111 |  GT1aa, GT1aalpha |
Cer | true | Whole-Glycan |
| GGM.000112 |  GT1b |
Cer | true | Whole-Glycan |
| GGM.000113 |  GT1c |
Cer | true | Whole-Glycan |
| GGM.000114 |  GQ1aa, GQ1aalpha |
Cer | true | Whole-Glycan |
| GGM.000115 |  GQ1b |
Cer | true | Whole-Glycan |
| GGM.000116 |  GQ1ba, GQ1balpha |
Cer | true | Whole-Glycan |
| GGM.000117 |  GQ1c |
Cer | true | Whole-Glycan |
| GGM.000118 |  GP1c |
Cer | true | Whole-Glycan |
| GGM.000119 |  GP1ca, GP1calpha |
Cer | true | Whole-Glycan |
| GGM.000120 |  GH1ca, GH1calpha |
Cer | true | Whole-Glycan |
| GGM.000121 |  Mono-fucosyl LN5, Mono-fucosyl LN_5 |
Cer | true | Whole-Glycan |
| GGM.000122 |  Mono-fucosyl LN3, Mono-fucosyl LN_3 |
Cer | true | Whole-Glycan |
| GGM.000201 |  B antigen (type 3) |
Ser/Thr | true | Whole-Glycan |
| GGM.000252 |  Polysialic acid |
R | true | Substructure |